Changes between Version 68 and Version 69 of UTGBMedaka/Track

Timestamp:

09/10/07 13:37:35 (18 years ago)

Author:

kobayashi

Comment:

--

UTGBMedaka/Track

@@ -222 +222 @@
 This track is not a regular track in the main window. This track opens when you search choromosome from keyword seach (select medaka-chr). You can also access this track from Chromosome OverView track (see above) as a link. This track shows the relationship among chromosome, scaffolds and genetic markers.
 
-The initial view is very busy, however, you can zoom into any region. It is also helphul to set width large, such as 10000.  As shown in the figure below, you can obtain the information how the neibouring scaffolds are ordered by genetic markers. Genetic distance among the genetic markers are shown. The color of the lines which represent genetic markers is changed Where recombination is observed between the neibouring markers.
-
-There are three types of scaffolds, unorderd, unoriented and mapped. Unorderd means the cluster of the scaffold. These scaffols are not segregated by genetic markers and mapped on the same region. Unoriented means the sololy mapped scaffold without the directional information. Mapped means the scaffold that are sololy and directionally mapped scaffolds. If two scaffolds are linked by sigle BAC clone and it is consistent with genetic marker inforamation, two scaffold are shown to be connected with holizontal line (ultracopntig).  Kunming means a typing panel only used to map scaffold on chromosome 11.
+The initial view is very busy, however, you can zoom into any region. It is also helpful to set width large, such as 10000.  As shown in the figure below, you can obtain the information how the neibouring scaffolds are ordered by genetic markers. Genetic distance among the genetic markers are shown. The color of the lines which represent genetic markers is changed where recombination is observed between the neibouring markers.
+
+There are three types of scaffolds, unorderd, unoriented and mapped. Unorderd means the cluster of the scaffold. These scaffolds are not segregated by genetic markers and mapped on the same region. Unoriented means the sololy mapped scaffold without the directional information. Mapped means the scaffold that is sololy and directionally mapped scaffolds. If two scaffolds are linked by sigle BAC clone and it is consistent with genetic marker inforamation, two scaffold are shown to be connected with holizontal line (ultracontig).  Kunming means a typing panel only used to map scaffolds on chromosome 11.
 
 [[Image(chr_scroll.jpg)]]