| Version 2 (modified by , 18 years ago) (diff) |
|---|
Migration
Migration tips from OldUTGB (before 2007 Sep.) to the new UTGB.
- Extract track information
for db in $(psql -U postgres -l | grep trackinformation | cut -f 2 -d ' '); do psql -U postgres -l $db -A -t -c "select name, species, revision, data_location from track where exhibit = 'public'" >> tracklist.dat; done;
Track Data
- dev.utgenome.org tracks
5pSageDme|drosophila|R4.1|http://dev.utgenome.org/~utgb/drosophila/tracks/R4.1/5pSageDme.xml 5pSageDmw|drosophila|R4.1|http://dev.utgenome.org/~utgb/drosophila/tracks/R4.1/5pSageDmw.xml FlyBaseCDS|drosophila|R4.1|http://dev.utgenome.org/~utgb/drosophila/tracks/R4.1/FlyBaseCDS.xml FlyBaseTranscript|drosophila|R4.1|http://dev.utgenome.org/~utgb/drosophila/tracks/R4.1/FlyBaseTranscript.xml GSvector|drosophila|R4.1|http://dev.utgenome.org/~utgb/drosophila/tracks/R4.1/GSvector.xml solexaDroso|drosophila|R4.1|http://dev.utgenome.org/~utgb/drosophila/tracks/R4.1/5pSageSolexa.xml cdna0713_1|human|hg18|http://dev.utgenome.org/~utgb/humanSuzuki/tracks/hg18/cdna0713_1.xml refSeqGenes|human|hg18|http://dev.utgenome.org/~utgb/humanSuzuki/tracks/hg18/refseqHg18.xml Overview Track|human|hg18|http://dev.utgenome.org/~utgb/human/genome_browser/tracks/overview/overview.xml Refseq Genes|human|hg18|http://dev.utgenome.org/~utgb/human/genome_browser/tracks/refseq/refseq.xml Ruler Track|human|hg18|http://dev.utgenome.org/~utgb/human/genome_browser/tracks/ruler/rulertrack.xml SolexaEcoP5pSAGE|human|hg18|http://dev.utgenome.org/~utgb/human/tracks/hg18/SolexaEcoP5pSAGE.xml SolexaSonicP5pSAGE|human|hg18|http://dev.utgenome.org/~utgb/human/tracks/hg18/SolexaSonic5pSAGE.xml Zooming Track|human|hg18|http://dev.utgenome.org/~utgb/human/genome_browser/tracks/zoomer/zoomertrack.xml refseqEcoP5pSAGE|human|hg18|http://dev.utgenome.org/~utgb/human/tracks/hg18/refseqEcoP5pSAGE.xml smn|human|hg18|http://dev.utgenome.org/~utgb/human/tracks/hg18/smn.xml BaseColor|human|hg17|http://dev.utgenome.org/~utgb/human/genome_browser/tracks/basecolor/basecolortrack.xml Overview Track|human|hg17|http://dev.utgenome.org/~utgb/human/genome_browser/tracks/overview/overview.xml Refseq Genes|human|hg17|http://dev.utgenome.org/~utgb/human/genome_browser/tracks/refseq/refseq.xml Ruler Track|human|hg17|http://dev.utgenome.org/~utgb/human/genome_browser/tracks/ruler/rulertrack.xml SolexaMethylation|human|hg17|http://dev.utgenome.org/~utgb/human/tracks/hg17/MethylationAll.xml SolexaMethylationR5|human|hg17|http://dev.utgenome.org/~utgb/human/tracks/hg17/MethylationR5All.xml Zooming Track|human|hg17|http://dev.utgenome.org/~utgb/human/genome_browser/tracks/zoomer/zoomertrack.xml 5End0920|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/5End0920.xml 5EndTrack|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/5End.xml BaseColor|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/basecolortrack.xml Overview Track|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/overview.xml RepeatMasker|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/Repeat.xml Ruler Track|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/rulertrack.xml Zooming Track|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/zoomertrack.xml chinaESTmap|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/chinaEst.xml fosmidEnd|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/fosmidEnd.xml norESTmap|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/Est.xml predictedGene|kaiko|build2|http://dev.utgenome.org/~utgb/kaiko/tracks/build2/predictedGene.xml Fugu|medaka|version1.0|http://dev.utgenome.org/~utgb/medaka/tracks/version1.0/Fugu.xml Overview Track|medaka|version1.0|http://dev.utgenome.org/~utgb/medaka/genome_browser/tracks/overview/overview.xml Ruler Track|medaka|version1.0|http://dev.utgenome.org/~utgb/medaka/genome_browser/tracks/ruler/rulertrack.xml Zooming Track|medaka|version1.0|http://dev.utgenome.org/~utgb/medaka/genome_browser/tracks/zoomer/zoomertrack.xml BacEnds|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/BacEnds.xml BaseColor|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/basecolortrack.xml Coverage|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/Coverage.xml FosmidEnds|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/FosmidEnds.xml GCcontent|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/GCcontent.xml Overview Track|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/overview.xml QualityValue|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/QualityValue.xml Ruler Track|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/rulertrack.xml Zooming Track|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/zoomertrack.xml flyHomo|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/flyHomo.xml humanHomo|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/humanHomo.xml yeastHomo|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/yeastHomo.xml pfamBlast|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/pfamBlast.xml rfamBlast|monosigaovata|build2|http://dev.utgenome.org/~utgb/monosigaovata/tracks/build2/rfamBlast.xml BaseColor|neurospora|broad7|http://dev.utgenome.org/~utgb//neurospora/genome_browser/tracks/basecolor/basecolortrack.xml Detailed Methylation Track 20070907-1|neurospora|broad7|http://itolab2.cb.k.u-tokyo.ac.jp/methylation_track/test/detailed_methylation_track.xml Overview Track|neurospora|broad7|http://dev.utgenome.org/~utgb//neurospora/genome_browser/tracks/overview/overview.xml Perspective Methylation Track 20070907-1|neurospora|broad7|http://itolab2.cb.k.u-tokyo.ac.jp/methylation_track/test/perspective_methylation_track.xml Zooming Track|neurospora|broad7|http://dev.utgenome.org/~utgb//neurospora/genome_browser/tracks/zoomer/zoomertrack.xml bisulfiteMappedTrack|neurospora|broad7|http://dev.utgenome.org/~utgb/neurospora/tracks/broad7/Meth.xml predictedTranscript|neurospora|broad7|http://dev.utgenome.org/~utgb/neurospora/tracks/broad7/transcript.xml
